BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002B01LP1|AL424899
(918 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1583 1605 0.0
>3x_Contig1583
Length = 12509
Score = 1605 bits (793), Expect = 0.0
Identities = 879/919 (95%), Gaps = 2/919 (0%)
Strand = Plus / Minus
Query: 1 agtattgcagtgacaagagtgttgchaattaattctagtgagattcgtgcaaacttgatg 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 4837 agtattgcagtgacaagagtgttgcaaattaattctagtgagattcgtgcaaacttgatg 4778
Query: 61 aaagatccagatttgacagcyagttaaatatttttmtcttctgatgacagagacgatccg 120
|||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||
Sbjct: 4777 aaagatccagatttgacagcaagtaaaatatttttatcttctgatgacagagacgatccg 4718
Query: 121 aatmacctattcaactactttgaagagacgaaagggttgcwcgaagcgtggatgcgccat 180
||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4717 aataacctattcaactactttgaagagacgaaagggttgcacgaagcgtggatgcgccat 4658
Query: 181 ttgtcacttgtagcaaacttatctgacgatctagtacataahttggagagcagcgacgaa 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4657 ttgtcacttgtagcaaacttatctgacgatctagtacataaattggagagcagcgacgaa 4598
Query: 241 agtyacaaggtactggtaaatyayhhcccacttcctgcmgtactcamagamactgtwaaa 300
||| ||||||||||||||||| | |||||||||||| ||||||| ||| ||||| |||
Sbjct: 4597 agtaacaaggtactggtaaataaaaacccacttcctgcagtactcaaagaaactgtaaaa 4538
Query: 301 cagtacgaagaaataggtgatgagcagcagcgtattgahaathttagggcgacacttttc 360
|||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||
Sbjct: 4537 cagtacgaagaaataggtgatgagcagcagcgtattgaaaatattagggcgaaacttttc 4478
Query: 361 cmatacttggatgagatttaggcgggaagagcaaaatacgctttagacaacmaatatath 420
| |||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||
Sbjct: 4477 caatacttggatgagattaaggcgggaagagcaaaatacgctttagaaaacaaatatata 4418
Query: 421 ttghyttccaccctgccacayatcacaaaagaggtttctgamtggtctcagagatggacc 480
||| ||| ||||||| ||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 4417 ttgaattcaaccctgcaacaaatcacaaaagaggtttctgaatggtctcagagatggacc 4358
Query: 481 cacattgayaactcactatttggtgactctccaacttctttyaagacattggtacagacg 540
|||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||| |
Sbjct: 4357 cacattgaaaactcactatttggtgactctccaacttctttaaagaaattggtacagaag 4298
Query: 541 gcagagaacatcacagagctgttgaccgtagagtcgactgattaccaaatggaataatgt 600
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4297 gcagagaacatcaaagagctgttgaccgtagagtcgactgattaccaaatggaataatgt 4238
Query: 601 atccagggatctataaattgatgacgttaatagtataatagaatatgtagcaatagcaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4237 atccagggatctataaattgatgacgttaatagtataatagaatatgtagcaatagcaat 4178
Query: 661 aaataatgagcggacaacagagtgccaggtgtacttatatttagcttatggcgttgtttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4177 aaataatgagcggacaacagagtgccaggtgtacttatatttagcttatggcgttgtttg 4118
Query: 721 tgttcgatatgctgattgtcagawattatcacatattgacgttcattatttaaactcaac 780
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 4117 tgttcgatatgctgattgtcagaaattatcacatattgacgttcattatttaaactcaac 4058
Query: 781 aaaataaagatgagttgacgatgagatacgacttaagttaattgacacatgcaaccaggt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4057 aaaataaagatgagttgacgatgagatacgacttaagttaattgacacatgcaaccaggt 3998
Query: 841 aaaggracaaatggatacccgtagaaagtcaataagaaccggagctatagtgatgtt-gg 899
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 3997 aaaggaacaaatggatacccgtagaaagtcaataagaaccggagctatagtgatgttagg 3938
Query: 900 gcggcc-atatttagargg 917
|||||| ||||||||| ||
Sbjct: 3937 gcggccaatatttagaagg 3919
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4214
Number of Sequences: 1807
Number of extensions: 4214
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 49 (99.7 bits)